ORF information
ORF ID TF00119 (frame 1) Gene ID SMc02820
Position and sequences 166163...167563(466 aa) Gene Name/synonym trbB -
Organism Sinorhizobium meliloti 1021 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism S.meliloti Gene entry SMc02820
Gene name cpaF Synonyms 1
Definition putative pilus assembly protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:sme03090]
Classification Sorting and Degradation
DBLinks GeneID 1231775 GI 15963897 UniProt Q92T39
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 48 .. 466 (419) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
S.meliloti :  BlastP (output)
Score Expect Query coverage Subject coverage
914 0.0 100 100
65 3e-09 95.0581 100.3067

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 GSPII_E [ 0 - 313 ] IPR001482 Type II secretion system protein E
ProfileScan PS00227 TUBULIN [ 0 - 248 ] IPR000217 Tubulin

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005525 Molecular Function GTP binding
0005874 Cellular Component microtubule
0007017 Biological Process microtubule-based process

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
182 2e-45 60.515 41.7476 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)