ORF information
ORF ID TF00117 (frame 1) Gene ID SMa1302
Position and sequences 711238...712227(329 aa) Gene Name/synonym avhB11 -
Organism Sinorhizobium meliloti 1021 Cluster 206 genes
Product Type IV secretion system protein VirB11 homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Conjugation
Function Component of the T4SS virB/D4 homolog that is required for conjugal transfer of the pSymA. However T4SS virB/D4 homolog is not required for the intracellular survival of the bacteria, thus it appears to be dispensable for plant symbiosis. VirB11 probably binds ATP.
Miscellaneus
References PubMed:11481432  PubMed:17158676 

Functional Annotation
  KEGG database
Organism S.meliloti Gene entry SMa1302
Gene name virB Synonyms 11
Definition VirB11 type IV secretion protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:sme03080]
Classification Sorting and Degradation
DBLinks GeneID 1235745 GI 16263162 UniProt Q92Z03
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 4 .. 329 (326) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
S.meliloti :  BlastP (output)
Score Expect Query coverage Subject coverage
643 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 GSPII_E [ 0 - 239 ] IPR001482 Type II secretion system protein E
HMMTigr TIGR02788 VirB11 [ 0 - 327 ] IPR014155 P-type DNA transfer ATPase VirB11

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
383 e-106 96.6565 92.4157 Q9RNC7 Type IV secretion system protein virB11

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)