ORF information
ORF ID TF01168 (frame 1) Gene ID pSB102_p16
Position and sequences 12080...13138(352 aa) Gene Name/synonym virD2 /traS
Organism Plasmid pSB102 Cluster 9 genes
Product T-DNA border endonuclease VirD2 homolog
1stcategory P-T4SS 2ndcategory Endonuclease_MobA/VirD2 Family
3rdcategory Conjugation
Function Component of a DNA transfer and replication (Dtr) protein, which is a part of a T4SS Tra of plasmid pSB102. Probably TraS functions as a DNA relaxase enzyme.
Miscellaneus
References PubMed:11812851 

Functional Annotation
  KEGG database
Organism B.bronchiseptica Gene entry BB0493
Gene name virD Synonyms 2
Definition plasmid-related protein
Classification Unassigned
DBLinks GeneDB BB0493 GeneID 2660313 GI 33599484 UniProt Q7WQ38
 
 
COG No results found !

Blast results (KEGG)
B.bronchiseptica :  BlastP (output)
Score Expect Query coverage Subject coverage
288 2e-76 84.6591 92.7492

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF03432 Relaxase [ 0 - 302 ] IPR005094 Endonuclease relaxase, MobA/VirD2
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
71.2 7e-12 46.875 43.8679 P06668 T-DNA border endonuclease virD2

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)