Atlas T4SS
ORF information
| ORF ID | TF01100 (frame 1) |
Gene ID | R100p095 |
| Position and sequences | 69777...71159(460 aa) |
Gene Name/synonym |
traH
- |
| Organism | Plasmid R100 |
Cluster |
10 genes |
| Product | Conjugal transfer protein TraH (IncFII R100) |
| 1stcategory | F-T4SS |
2ndcategory | TraH-F Family |
| 3rdcategory | Conjugation |
| Function | Component of T4SS Tra/Trb of the plasmid IncFII R100 involved in conjugal transfer of the plasmid. TraH is a periplasm subunit required for pilus outgrowth beyond the cell surface. |
| Miscellaneus | |
| References |
PubMed:10464182
|
Functional Annotation
| | KEGG database |
| Organism | E.coli_UTI89 |
Gene entry | UTI89_P132 |
| Gene name | traH |
Synonyms | |
| Definition | putative ATP-binding F pilus assembly protein |
| Classification | Unassigned |
| DBLinks |
GeneID 3996499 GI 91206377 UniProt Q1R1Q6 |
| |
| |
| COG | No results found ! |
Blast results (KEGG)
| E.coli_UTI89 : BlastP (output) |
| Score |
Expect |
Query coverage |
Subject coverage |
| 900 |
0.0 |
100 |
100 |
|
InterPro
| Evidence |
ID |
Name |
Loci start-end |
InterPro ID |
InterPro Name |
| ScanRegExp |
PS00214 |
FABP |
[ 0 - 378 ] |
IPR000463 |
Cytosolic fatty-acid binding |
| HMMPfam |
PF06122 |
TraH |
[ 0 - 445 ] |
IPR010927 |
TraH |
|
GO (Gene Onthology)
| ID |
Type |
Description |
| 0005215 |
Molecular Function |
transporter activity |
| 0006810 |
Biological Process |
transport |
| 0008289 |
Molecular Function |
lipid binding |
|
Blast Results (Swiss-Prot)
| Score |
Expect |
Coverage Query |
Coverage Subject |
Accesion Number |
Product (Click to view blast result) |
| 811 |
0.0 |
99.5652 |
100 |
P15069 |
Protein traH precursor |
|
Topology
Protein localization analysis
| |
| Psort |
bacterial inner membrane-0.1786-Affirmative
(output)
|