ORF information
ORF ID TF00110 (frame 1) Gene ID RHE_PE00313
Position and sequences 349269...350699(476 aa) Gene Name/synonym trbB -
Organism Rhizobium etli CFN 42 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PE0031
Gene name Synonyms
Definition probable CpaF pilus assembly protein, ATPase CpaF
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:ret03090]
Classification Sorting and Degradation
DBLinks GeneID 3895711 GI 86360587 UNAM_e RE1PE0000313 UniProt Q2K0V5
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 54 .. 470 (417) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
915 0.0 100 100
67 9e-10 95.0581 100.3067

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 GSPII_E [ 0 - 320 ] IPR001482 Type II secretion system protein E
ProfileScan PS00227 TUBULIN [ 0 - 255 ] IPR000217 Tubulin

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005525 Molecular Function GTP binding
0005874 Cellular Component microtubule
0007017 Biological Process microtubule-based process

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
177 1e-43 72.2689 53.5368 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)