ORF information
ORF ID TF01097 (frame 1) Gene ID CAD31458.1
Position and sequences 58087...58761(224 aa) Gene Name/synonym virB5 -
Organism Mesorhizobium loti R7A Cluster 4 genes
Product Type IV secretion system protein VirB5
1stcategory P-T4SS 2ndcategory VirB5/TrbF Family
3rdcategory Effector translocator
Function Component of a type IV secretion system (T4SS) vir homolog that plays a symbiotic role. T4SS is required for translocation of rhizobial effector proteins, such as Msi059 and Msi061 into the plant cells. VirB5 may be the minor component of extracellular T pilus.
Miscellaneus T4SS VirB/D4 is enconded on symbiotic island. The Mesorhizobium loti strain R7A symbiosis island is a 502-kb chromosomally integrated element which transfers to nonsymbiotic mesorhizobia in the environment, converting them to Lotus symbionts. It integrates into a phenylalanine tRNA gene in a process mediated by a P4-type integrase encoded at the left end of the element.
References PubMed:15469524  PubMed:12003951 

Functional Annotation
  KEGG database
Organism S.medicae Gene entry Smed_6158
Gene name Synonyms
Definition putative virB5 gene
Classification Unassigned
DBLinks GI 150378122
 
 
COG No results found !

Blast results (KEGG)
S.medicae :  BlastP (output)
Score Expect Query coverage Subject coverage
257 2e-67 99.5536 98.2379

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ProfileScan PS00778 HIS_ACID_PHOSPHAT_2 [ 0 - 191 ] IPR000560 Histidine acid phosphatase

GO (Gene Onthology)
ID Type Description
0003993 Molecular Function acid phosphatase activity

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
225 1e-58 99.5536 101.3636 P0A3W2 Protein virB5 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)