ORF information
ORF ID TF00109 (frame 1) Gene ID PSPTO_5045
Position and sequences 5744794...5745828(344 aa) Gene Name/synonym pilT -
Organism Pseudomonas syringae pv. tomato str. DC3000 Cluster 206 genes
Product Twitching mobility protein
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory
Function
Miscellaneus This ORF is not a member of T4SS. It was included into this cluster because it belongs to the GSPE family.

Functional Annotation
  KEGG database
Organism P.syringae Gene entry PSPTO_5045
Gene name Synonyms
Definition twitching motility protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:pst03090]
Classification Sorting and Degradation
DBLinks GeneID 1186730 GI 28872159 TIGR PSPTO_5045 UniProt Q87V94
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 1 .. 344 (344) Tfp pilus assembly protein, pilus retraction ATPase PilT

Blast results (KEGG)
P.syringae :  BlastP (output)
Score Expect Query coverage Subject coverage
669 0.0 100 100
279 6e-74 95.0581 100.3067

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR01420 pilT_fam [ 0 - 343 ] IPR006321 Pilus retraction protein PilT
BlastProDom PD000739 GSPII_E [ 0 - 198 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
605 e-172 100 100 P24559 Twitching mobility protein

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1829-Affirmative (output)