ORF information
ORF ID TF01085 (frame 1) Gene ID R100p089
Position and sequences 67095...67856(253 aa) Gene Name/synonym traF -
Organism Plasmid R100 Cluster 10 genes
Product Conjugal transfer protein TraF (IncFII R100)
1stcategory F-T4SS 2ndcategory TraF-F Family
3rdcategory Conjugation
Function Component of T4SS Tra/Trb of the plasmid IncFII R100 involved in conjugal transfer of the plasmid. TraF is a periplasm subunit and can be involved in pilus assembly.
Miscellaneus Periplasmic protein ()
References PubMed:3042757  PubMed:10464182 

Functional Annotation
  KEGG database
Organism E.coli_UTI89 Gene entry UTI89_P125
Gene name traF Synonyms
Definition F pilus assembly periplasmic protein TraF
Classification Unassigned
DBLinks GeneID 3996492 GI 91206370 UniProt Q1R1R3
 
 
COG No results found !

Blast results (KEGG)
E.coli_UTI89 :  BlastP (output)
Score Expect Query coverage Subject coverage
515 e-145 100 98.4436

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02739 TraF: type-F conjugative transfer system pil [ 0 - 253 ] IPR014110 Type-F conjugative transfer system pilin assembly protein TraF
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
503 e-142 97.6285 100 P14497 Protein traF precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2211-Affirmative (output)