ORF ID	TF01079 (frame 1)	Gene ID	pIncPalpha_00310
Position and sequences	46058...46591(177 aa)	Gene Name/synonym	traF -
Organism	Birmingham IncP-alpha plasmid	Cluster	24 genes
Product	Conjugal transfer protein TraF
1stcategory	P-T4SS	2ndcategory	Peptidase S26C Family
3rdcategory	Conjugation
Function	Component of the Tra system that constitutes the Tra1 block, which is mainly concerned with triggering DNA transfer. TraF is required for donor-specific phage sensitivity.
Miscellaneus	For transfer the plasmid requires two blocks of genes. The transfer origin, oriT and genes traA to traM constitute the Tra1 block, which is mainly concerned with trigering DNA transfer, while the genes trbA to trbP form a Tra2 operon concerned mainly with mating pair formation.
References	PubMed:8954881  PubMed:11976307  PubMed:8021214

	KEGG database
Organism	Acidovorax_JS42	Gene entry	Ajs_4318
Gene name		Synonyms
Definition	TraF protein of DNA transfer system
Classification	Unassigned
DBLinks	GeneID 4670444 GI 121582615 UniProt A1WDT4
COG	No results found !

Acidovorax_JS42 :  BlastP (output)

Score Expect Query coverage Subject coverage 274 9e-73 100 100

Evidence ID Name Loci start-end InterPro ID InterPro Name HMMTigr TIGR02771 TraF_Ti: conjugative transfer signal peptida [ 0 - 177 ] IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF HMMPanther PTHR12383 PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED [ 0 - 168 ] IPR014037 Peptidase S26A

ID Type Description 0008236 Molecular Function serine-type peptidase activity 0009003 Molecular Function signal peptidase activity 0016021 Cellular Component integral to membrane

Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result) 358 5e-99 100 100 Q03450 Plasmid transfer protein traF precursor

PHOBIUS	txt

Psort	bacterial inner membrane-0.2784-Affirmative (output)