ORF information
ORF ID TF01078 (frame 1) Gene ID CAD31513.1
Position and sequences 134352...134900(182 aa) Gene Name/synonym traF -
Organism Mesorhizobium loti R7A Cluster 24 genes
Product Conjugal transfer protein TraF homolog
1stcategory P-T4SS 2ndcategory Peptidase S26C Family
3rdcategory Conjugation
Function Component of a T4SS Tra/Trb encoded in symbiosis island of M. loti R7A, which probably is involved in island transfer via mechanism analogue of conjugation.
Miscellaneus The Mesorhizobium loti strain R7A symbiosis island is a 502-kb chromosomally integrated element which transfers to nonsymbiotic mesorhizobia in the environment, converting them to Lotus symbionts. It integrates into a phenylalanine tRNA gene in a process mediated by a P4-type integrase encoded at the left end of the element.
References PubMed:15469524  PubMed:12003951 

Functional Annotation
  KEGG database
Organism M.loti Gene entry mlr6188
Gene name Synonyms
Definition plasmid transfer protein TraF
Classification Unassigned
DBLinks GeneID 1229389 GI 13475170 Kazusa mlr6188 UniProt Q98A24
 
 
COG No results found !

Blast results (KEGG)
M.loti :  BlastP (output)
Score Expect Query coverage Subject coverage
366 e-100 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
68.9 1e-11 92.3077 100.5618 Q05119 Plasmid transfer protein traF precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2444-Affirmative (output)