ORF information
ORF ID TF01074 (frame 1) Gene ID pIncPalpha_00140
Position and sequences 19797...20234(145 aa) Gene Name/synonym trbC -
Organism Birmingham IncP-alpha plasmid Cluster 22 genes
Product Conjugal transfer protein TrbC
1stcategory P-T4SS 2ndcategory VirB2/TrbC Family
3rdcategory Conjugation
Function Component of the Trb system that is referred to as the Tra2 operon of the plasmid IncP-alpha, which encodes the apparatus for mating pair formation, the first step in conjugative transfer.
Miscellaneus For transfer the plasmid requires two blocks of genes. The transfer origin, oriT and genes traA to traM constitute the Tra1 block, which is mainly concerned with trigering DNA transfer, while the genes trbA to trbP form a Tra2 operon concerned mainly with mating pair formation.
References PubMed:8954881 

Functional Annotation
  KEGG database
Organism Acidovorax_JS42 Gene entry Ajs_4273
Gene name Synonyms
Definition conjugal transfer protein TrbC
Classification Unassigned
DBLinks GeneID 4670501 GI 121582578 UniProt A1WDP7
 
 
COG No results found !

Blast results (KEGG)
Acidovorax_JS42 :  BlastP (output)
Score Expect Query coverage Subject coverage
201 6e-51 84.8276 80.5195

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF04956 TrbC [ 0 - 112 ] IPR007039 Conjugal transfer,TrbC
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
83.6 2e-16 65.5172 74.8031 P55396 Probable conjugal transfer protein trbC

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.4927-Affirmative (output)