ORF information
ORF ID TF01072 (frame 1) Gene ID CAD31434.1
Position and sequences 30917...31225(102 aa) Gene Name/synonym trbC -
Organism Mesorhizobium loti R7A Cluster 22 genes
Product Conjugal transfer protein TrbC homolog
1stcategory P-T4SS 2ndcategory VirB2/TrbC Family
3rdcategory Conjugation
Function Component of a T4SS Tra/Trb encoded in symbiosis island of M. loti R7A, which probably is involved in island transfer via mechanism analogue of conjugation.
Miscellaneus The Mesorhizobium loti strain R7A symbiosis island is a 502-kb chromosomally integrated element which transfers to nonsymbiotic mesorhizobia in the environment, converting them to Lotus symbionts. It integrates into a phenylalanine tRNA gene in a process mediated by a P4-type integrase encoded at the left end of the element.
References PubMed:15469524  PubMed:12003951 

Functional Annotation
  KEGG database
Organism M.loti Gene entry mlr6398
Gene name Synonyms
Definition conjugal transfer protein trbC
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:mlo03080]
Classification Sorting and Degradation
DBLinks GeneID 1229572 GI 13475353 Kazusa mlr6398 UniProt Q989J3
 
 
COG No results found !

Blast results (KEGG)
M.loti :  BlastP (output)
Score Expect Query coverage Subject coverage
197 9e-50 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
56.2 3e-08 95.098 81.1024 P55396 Probable conjugal transfer protein trbC

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.4206-Affirmative (output)