ORF information
ORF ID TF01070 (frame 1) Gene ID R46_008
Position and sequences 3160...3894(244 aa) Gene Name/synonym traL /virB1
Organism Plasmid R46 Cluster 20 genes
Product Conjugal transfer protein TraL (IncN R46)
1stcategory P-T4SS 2ndcategory VirB1 Family
3rdcategory Conjugation
Function Component of a T4SS Tra of transmissible plasmid R46 that encodes a putative mating pair formation complex, which may be involved in conjugal transfer of this plasmid.
Miscellaneus Plamid R46 was shown to be transmissible to some species of Pseudomonas.
References PubMed:8162189  PubMed:9300052 

Functional Annotation
  KEGG database
Organism X.fastidiosa Gene entry XFa0002
Gene name Synonyms
Definition conjugal transfer protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:xfa03080]
Classification Sorting and Degradation
DBLinks GeneID 1125447 GI 10956713 Unicamp XFa0002
 
 
COG No results found !

Blast results (KEGG)
X.fastidiosa :  BlastP (output)
Score Expect Query coverage Subject coverage
131 2e-29 58.6066 74.8691

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF01464 SLT [ 0 - 177 ] IPR008258 Lytic transglycosylase-like, catalytic
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
98.2 3e-20 72.541 76.8908 Q8YDZ5 Type IV secretion system protein virB1

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1935-Affirmative (output)