ORF information
ORF ID TF00107 (frame 1) Gene ID Psyr_0478
Position and sequences 516463...517497(344 aa) Gene Name/synonym pilT -
Organism Pseudomonas syringae pv. syringae B728a Cluster 206 genes
Product Twitching mobility protein
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory
Function
Miscellaneus This ORF is not a member of T4SS. It was included into this cluster because it belongs to the GSPE family.

Functional Annotation
  KEGG database
Organism P.syringae_B728a Gene entry Psyr_0478
Gene name pilT Synonyms
Definition pilus retraction protein PilT
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:psb03090]
Classification Sorting and Degradation
DBLinks GeneID 3365954 GI 66043745 UniProt Q4ZZ74
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 1 .. 344 (344) Tfp pilus assembly protein, pilus retraction ATPase PilT

Blast results (KEGG)
P.syringae_B728a :  BlastP (output)
Score Expect Query coverage Subject coverage
669 0.0 100 100
281 1e-74 95.0581 100.3067

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMSmart SM00382 AAA [ 0 - 256 ] IPR003593 AAA+ ATPase, core
HMMTigr TIGR01420 pilT_fam [ 0 - 343 ] IPR006321 Pilus retraction protein PilT
BlastProDom PD000739 GSPII_E [ 0 - 198 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0000166 Molecular Function nucleotide binding
0017111 Molecular Function nucleoside-triphosphatase activity
0005524 Molecular Function ATP binding
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
612 e-175 100 100 P24559 Twitching mobility protein

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1829-Affirmative (output)