ORF information
ORF ID TF01065 (frame 1) Gene ID pSB102_p33
Position and sequences 28380...29108(242 aa) Gene Name/synonym traF /virB5
Organism Plasmid pSB102 Cluster 21 genes
Product Conjugal transfer protein TraF (TraFpSB102)
1stcategory P-T4SS 2ndcategory VirB5/TrbF Family
3rdcategory Conjugation
Function Component of the T4SS Tra of the plasmid pSB102 that encodes a putative mating pair formation complex, which may be involved in conjugal transfer of this plasmid.
Miscellaneus
References PubMed:11812851 

Functional Annotation
  KEGG database
Organism P.syringae Gene entry PSPTO_0531
Gene name Synonyms
Definition type IV secretion system protein, putative
Classification Unassigned
DBLinks GeneID 1182140 GI 28867760 TIGR PSPTO_0531 UniProt Q88A64
 
 
COG No results found !

Blast results (KEGG)
P.syringae :  BlastP (output)
Score Expect Query coverage Subject coverage
298 9e-80 87.1901 83.0709

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF07996 T4SS [ 0 - 240 ] IPR012991 Type IV secretion system
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
201 2e-51 95.0413 96.6387 Q2YJ75 Type IV secretion system protein virB5 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2296-Affirmative (output)