ORF information
ORF ID TF01056 (frame 1) Gene ID R46_019
Position and sequences 11287...12447(386 aa) Gene Name/synonym traF /virB10
Organism Plasmid R46 Cluster 68 genes
Product Conjugal transfer protein TraF (IncN R46)
1stcategory P-T4SS 2ndcategory VirB10/TrbI Family
3rdcategory Conjugation
Function Component of a T4SS Tra of transmissible plasmid R46 that encoded a putative mating pair formation complex, which is involved in conjugal transfer of this plasmid
Miscellaneus Plamid R46 was shown to be transmissible to some species of Pseudomonas.
References PubMed:8162189  PubMed:9300052 

Functional Annotation
  KEGG database
Organism S.medicae Gene entry Smed_6153
Gene name Synonyms
Definition conjugation TrbI family protein
Classification Unassigned
DBLinks GI 150378117
 
 
COG No results found !

Blast results (KEGG)
S.medicae :  BlastP (output)
Score Expect Query coverage Subject coverage
181 3e-44 75.6477 78.7634

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF03743 TrbI [ 0 - 382 ] IPR005498 Bacterial conjugation TrbI-like protein

GO (Gene Onthology)
ID Type Description
0009291 Biological Process unidirectional conjugation

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
175 3e-43 94.0415 98.9474 Q0GK35 Type IV secretion system protein virB10

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.618-Affirmative (output)