ORF information
ORF ID TF00105 (frame 1) Gene ID PP5093
Position and sequences 5816934...5817944(336 aa) Gene Name/synonym pilT -
Organism Pseudomonas putida KT2440 Cluster 206 genes
Product Twitching mobility protein
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory
Function
Miscellaneus This ORF is not a member of T4SS. It was included into this cluster because it belongs to the GSPE family.

Functional Annotation
  KEGG database
Organism P.putida Gene entry PP_5093
Gene name pilT Synonyms
Definition type IV pili twitching motility protein PilT
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:ppu03090]
Classification Sorting and Degradation
DBLinks GeneID 1042013 GI 26991769 TIGR PP5093 UniProt Q88CT7
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 5 .. 336 (332) Tfp pilus assembly protein, pilus retraction ATPase PilT

Blast results (KEGG)
P.putida :  BlastP (output)
Score Expect Query coverage Subject coverage
637 0.0 100 100
253 4e-66 94.3452 97.2393

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR01420 pilT_fam [ 0 - 335 ] IPR006321 Pilus retraction protein PilT
BlastProDom PD000739 GSPII_E [ 0 - 202 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
348 3e-95 97.9167 95.6395 P24559 Twitching mobility protein

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2508-Affirmative (output)