ORF information
ORF ID TF01034 (frame 1) Gene ID R46_015
Position and sequences 8435...9475(346 aa) Gene Name/synonym traD /virB6
Organism Plasmid R46 Cluster 67 genes
Product Conjugal transfer protein TraD (IncN R46)
1stcategory P-T4SS 2ndcategory VirB6/TrbL Family
3rdcategory Conjugation
Function Component of a T4SS Tra of transmissible plasmid R46 that encodes a putative mating pair formation complex, which is involved in conjugal transfer of this plasmid
Miscellaneus Plamid R46 was shown to be transmissible to some species of Pseudomonas.
References PubMed:8162189  PubMed:9300052 

Functional Annotation
  KEGG database
Organism B.cenocepacia_HI2424 Gene entry Bcen2424_0
Gene name Synonyms
Definition TrbL/VirB6 plasmid conjugal transfer protein
Classification Unassigned
DBLinks GI 116688473
 
 
COG No results found !

Blast results (KEGG)
B.cenocepacia_HI2424 :  BlastP (output)
Score Expect Query coverage Subject coverage
201 4e-50 98.8439 92.6121

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF04610 TrbL [ 0 - 278 ] IPR007688 Conjugal transfer, TrbL/VirB6

GO (Gene Onthology)
ID Type Description
0000747 Biological Process conjugation with cellular fusion

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
87.8 7e-17 89.8844 92.219 Q8YDZ2 Type IV secretion system protein virB6

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1808-Affirmative (output)