ORF information
ORF ID TF01033 (frame 1) Gene ID CAD31457.1
Position and sequences 57142...58029(295 aa) Gene Name/synonym virB6 -
Organism Mesorhizobium loti R7A Cluster 67 genes
Product Type IV secretion system protein VirB6 homolog
1stcategory P-T4SS 2ndcategory VirB6/TrbL Family
3rdcategory Effector translocator
Function Component of a type IV secretion system (T4SS) vir homolog that plays a symbiotic role. T4SS is required for translocation of rhizobial effector proteins, such as Msi059 and Msi061 into the plant cells. VirB6 may be required for stabilization of VirB5 and VirB3 and formation of VirB7 homodimer.
Miscellaneus T4SS VirB/D4 is enconded on symbiotic island. The Mesorhizobium loti strain R7A symbiosis island is a 502-kb chromosomally integrated element which transfers to nonsymbiotic mesorhizobia in the environment, converting them to Lotus symbionts. It integrates into a phenylalanine tRNA gene in a process mediated by a P4-type integrase encoded at the left end of the element.
References PubMed:15469524  PubMed:12003951 

Functional Annotation
  KEGG database
Organism S.medicae Gene entry Smed_6157
Gene name Synonyms
Definition TrbL/VirB6 plasmid conjugal transfer protein
Classification Unassigned
DBLinks GI 150378121
 
 
COG No results found !

Blast results (KEGG)
S.medicae :  BlastP (output)
Score Expect Query coverage Subject coverage
414 e-114 99.322 99.322
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
411 e-114 98.6441 98.6441 P17796 Protein virB6

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.3994-Affirmative (output)