ORF information
ORF ID TF01021 (frame 1) Gene ID pKJK5_4
Position and sequences 3707...4669(320 aa) Gene Name/synonym trbB -
Organism IncP-1 plasmid pKJK5 Cluster 206 genes
Product Conjugal transfer protein TrbB (IncP-1 pKJK5)
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Conjugation
Function Component of T4SS Tra/Trb of plasmid IncP-1 pKJK5, which can be involved in conjugal transfer of the plasmid.
Miscellaneus
References PubMed:17132149  PubMed:17306874 

Functional Annotation
  KEGG database
Organism Acidovorax_JS42 Gene entry Ajs_4274
Gene name Synonyms
Definition type II secretion system protein E
Classification Unassigned
DBLinks GeneID 4670496 GI 121582579 UniProt A1WDP8
 
 
COG No results found !

Blast results (KEGG)
Acidovorax_JS42 :  BlastP (output)
Score Expect Query coverage Subject coverage
547 e-154 98.4375 98.1308

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02782 TrbB_P [ 0 - 317 ] IPR014149 P-type conjugative transfer ATPase TrbB
BlastProDom PD000739 GSPII_E [ 0 - 221 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
278 2e-74 99.0625 98.1424 P54907 Conjugal transfer protein trbB

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2359-Affirmative (output)