ORF information
ORF ID TF00102 (frame 1) Gene ID PFL_0695
Position and sequences 807007...808281(424 aa) Gene Name/synonym trbB -
Organism Pseudomonas fluorescens Pf 5 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism P.fluorescens Gene entry PFL_0695
Gene name Synonyms
Definition type II/IV secretion system protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:pfl03090]
Classification Sorting and Degradation
DBLinks GeneID 3481284 GI 70734197 TIGR PFL_0695 UniProt Q4KIU6
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 23 .. 423 (401) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
P.fluorescens :  BlastP (output)
Score Expect Query coverage Subject coverage
828 0.0 100 100
63 1e-08 78.7952 100.3067

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMSmart SM00382 AAA [ 0 - 383 ] IPR003593 AAA+ ATPase, core
BlastProDom PD000739 GSPII_E [ 0 - 291 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0000166 Molecular Function nucleotide binding
0017111 Molecular Function nucleoside-triphosphatase activity
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
195 4e-49 65.8019 40.9154 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.272-Affirmative (output)