ORF information
ORF ID TF00100 (frame 1) Gene ID OTBS_0006
Position and sequences 5628...6617(329 aa) Gene Name/synonym avhB11 -
Organism Orientia tsutsugamushi str. Boryong Cluster 206 genes
Product Type IV secretion system protein VirB11 homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus Several virB and virD4 genes of O. tsutsugamushi were transcriptionally active in cultured fibroblast and macrophage cell lines as well as in experimentally infected animals. This finding suggests that the T4SS may function in Orientia and may have a significant role in pathogenesis of scrub typhus.
References PubMed:17483455  PubMed:21458586 

Functional Annotation
  KEGG database
Organism O.tsutsugamushi Gene entry OTBS_0006
Gene name virB Synonyms 11
Definition type IV secretion system protein
Classification Unassigned
DBLinks GeneID 5218324 GI 148284003 UniProt A5CBW8
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 6 .. 329 (324) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
O.tsutsugamushi :  BlastP (output)
Score Expect Query coverage Subject coverage
644 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF00437 GSPII_E [ 0 - 312 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 GSPII_E [ 0 - 236 ] IPR001482 Type II secretion system protein E
HMMTigr TIGR02788 VirB11 [ 0 - 323 ] IPR014155 P-type DNA transfer ATPase VirB11

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
228 4e-59 97.5684 94.1011 Q6FYW0 Type IV secretion system protein virB11

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)